BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006H11LP1|AL425608
(967 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1730 1692 0.0
>3x_Contig1730
Length = 17223
Score = 1692 bits (845), Expect = 0.0
Identities = 931/967 (96%), Gaps = 2/967 (0%)
Strand = Plus / Minus
Query: 3 agggtaaggsttgagattaggtaaaaagttattctggagttactgtttctttttttttga 62
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11683 agggtaaggcttgagattaggtaaaaagttattctggagttactgtttctttttttttga 11624
Query: 63 tcatactgaagagagaaaacaactatataaaatacgaagcaagawacgaaatcaaataca 122
|||||||||||||||| | ||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 11623 tcatactgaagagagacagcaactatataaaatacgaagcaagatacgaaatcagataca 11564
Query: 123 caaactgatatttgcagtgtcatacaaaacttataaatccatttatacttgaraggagct 182
|||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 11563 caaactgatatttgcagtgtcatacaaaacttataagtccatttatacttgagaggagct 11504
Query: 183 gttttctgtcggatacaattcgaggataaggagatacaatattttkcgtgtgctgtatcg 242
||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 11503 gttttctgtcggatacagttcgaggataaggagatacaatattttgcgtgtgctgtatcg 11444
Query: 243 gttttataactatggcaaatattgttgaaaatgcartgcagcacttgtatttacaggtga 302
|||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||
Sbjct: 11443 gttttataactatggcaaatattgttgaaagtgcagtgcagcacttgtatttgcaggtga 11384
Query: 303 aaaatgctatggatgtgtcgtttataaattctaaagctccacctgcttctgtgataacra 362
|| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 11383 aagatgctatggatgtgtcgtttatgaattctaaagctccacctgcttctgtgataacga 11324
Query: 363 agaaacaggatattttaccttggatttcttatgggaaamttgccttagcactacctgttg 422
|||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 11323 agaaacaggatattttgccttggatttctgatgggaaacttgccttagcactacctgttg 11264
Query: 423 ttgcttattgrctttattmgatatttttccattacattaataccaatraggttttcgaac 482
|||||||||| ||||||| ||| ||||||||||||||| |||||||| ||||||||||||
Sbjct: 11263 ttgcttattggctttattcgatgtttttccattacattgataccaatgaggttttcgaac 11204
Query: 483 aatacaggattcatccaagcraggaagtacaacagcggaataaggcctcaagattagaag 542
| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 11203 agtacaggattcatccaagcgaggaagtacaacagcggaataaggcctcaagattagagg 11144
Query: 543 ttttaaaagaagtgatattacaacatttcattcaaacatttactggacttggtatgctct 602
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11143 ttttaaaagaggtgatattacaacatttcattcaaacatttactggacttggtatgctct 11084
Query: 603 acttggatcctgtgccgacttcagggtttgagaagtatgagatgtggaaatggaggcaat 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11083 acttggatcctgtgccgacttcagggtttgagaagtatgagatgtggaaatggaggcaat 11024
Query: 663 ctttaccctttttcgtaccatctgttttcatcaagtttatgtatwaawaaggawggtcta 722
|||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||
Sbjct: 11023 ctttaccctttttcgtaccatctgttttcatcaagtttatgtattgctatggatggtcta 10964
Query: 723 tgataaggatatttattgggttttgtatcgtagattcgtggcagtattggctgcataggg 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10963 tgataaggatatttattgggttttgtatcgtagattcgtggcagtattggctgcataggg 10904
Query: 783 tgatgcatatgaataagacactttacaaaaaattccactcacgtcatcataggttatatg 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10903 tgatgcatatgaataagacactttacaaaaaattccactcacgtcatcataggttatatg 10844
Query: 843 ttccttatgcgtacggtgcattgtacaatt-cccagtggaaggtttcctccttgacactt 901
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 10843 ttccttatgcgtacggtgcattgtacaattccccagtggaaggtttcctccttgacactt 10784
Query: 902 tgggtacaggcattgctgcaatcgtgacamaattaaatcatacagaacaag-tgttctat 960
||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 10783 tgggtacaggcattgctgcaatcgtgacacaattaaatcatacagaacaagttgttctat 10724
Query: 961 acacttt 967
|||||||
Sbjct: 10723 acacttt 10717
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7323
Number of Sequences: 1807
Number of extensions: 7323
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 967
length of database: 10,358,551
effective HSP length: 16
effective length of query: 951
effective length of database: 10,329,639
effective search space: 9823486689
effective search space used: 9823486689
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)